There’s a new article out in Science tracing the splits in gut flora. It looks as if the gut bacteria in chimpanzees split with those in humans 5.3 million years: doesn’t quite match our genetic estimates based on Human/chimp autosomal DNA differences, but it’s in the ball park. They estimate the human-gorilla split at 15.6 million year ago, but that can’t be right: we know that gorillas split off just a bit before the human-chimp split. Perhaps gorilla diet changed drastically, and maybe they picked up new bacteria from some other species.
Different populations of modern humans apparently have pretty different microbiomes. The gut bacteria from people in Malawi appear to have diverged 1.7 million years ago from those in Europeans (people from Connecticut). That is surely too old to be a consequence of modern humans’ trek out of Africa: it looks as if AMH, after leaving Africa, picked up gut flora from archaic sapiens like Neanderthals and Denisovans and dwarves.
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